CMRR Downloads

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Software packages developed at the CMRR that you may find useful in your own MR research:

Image Reconstruction Tools - Intelligent Medical Imaging and Image Processing Lab

SWIFT - SWeep Imaging with Fourier Transformation

Multi-band EPI - highly-accelerated 2D EPI pulse sequences for Siemens scanners

Adiabatic T1r/T2r/RAFFn Sequences - Relaxation Mapping Sequences for Siemens scanners

Spectroscopy Tools - Spectroscopy pulse sequences and FASTMAP shimming tool for Siemens scanners

Spectroscopy Analysis  - Matlab-based spectral processing and analysis package

FAIR ASST and OPTIMAL FAIR - Perfusion imaging methods with pulsed arterial spin labeling (PASL)

MB-EPI PCASL - Multi-band EPI pseudo-continuous arterial spin labeling (PCASL)

Stimulate - multifunctional image analysis tool

PhysioFix User's Guide - adjust for respiration and cardio effects

PhysioFix for Matlab

Cluster probability - clustered pixel probability

Sarcalc - energy used by your pulse sequence

MTM - Multi-Taper Methods for signal/noise analysis

FASTMAP - magnet shimming tool for Agilent/Varian scanners

NMR Kitchen - software based on product operator calculation

MIX - MIX toolbox

Ghost/Object - Referenceless Nyquist Ghost Correction software

Graph Curvature Toolbox - Graph Curvature Toolbox software

BNIF - Brain Network Information Flow - coming soon!

AutoVOI - Automated volume‐of‐interest (VOI) prescription pipeline for single‐voxel MRS

Siemens Magnetom Research World - Some CMRR sequences are available here

ALS Tract-Specific Analysis - MATLAB source code for paper by Pramod Pisharady

ALS Multimodal Analysis - MATLAB source code for paper by Pramod Pisharady